virus bioinformatics
Posts tagged “virus bioinformatics”.
A conserved G-quadruplex in the Zika virus 3' terminal region
This study examines evidence for a conserved G-quadruplex in the Zika virus 3' terminal region and discusses what the observed DDX17 interaction does, and does not, imply.
RNA–RNA interaction analysis of Japanese encephalitis virus
This study combines computational and biophysical analysis to characterize a long-range RNA-RNA interaction in Japanese encephalitis virus and to test the role of the conserved cyclization sequence.
Strukturierte RNAs in Viren (in German)
In this mini-review we discuss the concept of RNA structure conservation in viruses, using exoribonuclease-resistant RNAs from flaviviruses as prominent examples
RNA structure conservation and molecular epidemiology of TBEV
This study combines comparative RNA structure analysis with molecular epidemiology to characterize conserved and variable 3' UTR architectures across tick-borne encephalitis virus lineages.
Functional RNA structures in flavivirus 3′UTRs: xrRNAs, dumbbells, stem-loops
This chapter compares conserved functional RNA elements in the 3' UTRs of mosquito-borne flaviviruses, including xrRNAs, dumbbells, and terminal stem-loops.