Tag

RNA design

Posts tagged “RNA design”.

All3DAIalphavirusbacteriaco-transcriptional RNA foldingenergy landscapesflavivirusmolecular epidemiologynew methodNGSnon-coding RNAOne HealthRNA designRNA folding kineticsRNA-protein interactionRNA-RNA interactionRNA structure conservationRNA structure predictionSHAPEsynthetic biologytoolsViennaRNAvirus bioinformaticsxrRNA
Featured · Publications

Rational design of mechanically active RNAs

This Nucleic Acids Research paper shows that synthetic xrRNAs can be designed from topological rules and validated experimentally as mechanically active RNAs.

Tue 12 May 2026
Read the post →
All posts
Thu 08 January 2026
Publications

A first look at rational design of mechanically active RNAs

A preprint-stage note on the design logic behind synthetic xrRNAs and mechanically active RNAs.

Read →
Thu 23 March 2023
Publications

Strukturierte RNAs in Viren (in German)

In this mini-review we discuss the concept of RNA structure conservation in viruses, using exoribonuclease-resistant RNAs from flaviviruses as prominent examples

Read →
Fri 18 November 2022
Outreach

The link between mRNA vaccine design and barbeque optimization

A short podcast appearance on optimization, data sharing, and what mRNA design can teach us about iterative engineering problems.

Read →
Sun 01 July 2018
Publications

In silico design of ligand-triggered RNA switches

A computational workflow for designing ligand-triggered RNA switches, with emphasis on sequence design, folding kinetics, and candidate prioritization.

Read →