NGS
Posts tagged “NGS”.
Hfq, Crc, and antibiotic resistance in P. aeruginosa
This study examines carbon catabolite repression and its indirect effects on antibiotic susceptibility in Pseudomonas aeruginosa.
How Pseudomonas aeruginosa responds to colistin and tobramycin
This study combines RNA-seq and ribosome profiling to show how Pseudomonas aeruginosa rewires both transcription and translation when challenged with the last-resort antibiotics colistin and tobramycin.
RNA-seq profiling of Pseudomonas aeruginosa under anoxic cystic fibrosis-like growth
This study uses RNA-seq to compare planktonic, short-term anoxic, and long-term anoxic biofilm states of Pseudomonas aeruginosa PA14 in synthetic cystic fibrosis sputum medium, revealing transcriptomic changes linked...
mRNA degradation occurs on ribosome complexes in Drosophila cells
This study shows that bulk and miRNA-guided mRNA degradation in Drosophila cells occurs on ribosome-associated messenger ribonucleoprotein complexes, linking decay machinery, translation, and high-throughput...
Building efficient NGS analysis pipelines with ViennaNGS
ViennaNGS is a modular toolbox for building reproducible NGS analysis workflows, combining Perl library code, utility scripts, and browser-oriented data-export components for early high-throughput genomics pipelines.