SHAPE directed RNA folding
Three approaches for SHAPE-guided RNA structur predcition with ViennaRNA
General and miRNA-mediated mRNA degradation occurs on ribosome complexes in Drosophila cells
mRNA degradation in Drosophila cells
ViennaNGS: A toolbox for building efficient next-generation sequencing analysis pipelines
A collection of utilities for next-generation sequencing (NGS) data analysis
Memory-efficient-RNA-energy-landscape-exploration
An efficient approach for local flooding of the lower portion of an RNA energy landscape
How to compute normalized RNA-seq expression from multicov files
Why you should use TPM rather than RPKM
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